Borrelia phylostratigraphy - DL Group

Borrelia phylostratigraphy table and profiles

	Phylostratum (ps)	Protein_ID	Gene_locus_tag	Start	End	Strand	Gene_length	Protein_length	Gene_name	Gene_symbol_gff	Protein_sequence	Graph_name	SP	RB	BL	BF
wdt_ID	Phylostratum (ps)	Protein_ID	Gene_locus_tag	Start	End	Strand	Gene_length	Protein_length	Gene_name	Gene_symbol_gff	Protein_sequence	Graph_name	SP	RB	BL	BF
1	6	WP_044283645.1	BB_RS06590	14,343	15,155	+	813	270	DUF685 domain-containing protein		MADDQEKLLIDEEETVQIKDLNKVTTVNDTDLLLLDDGAASSNAITFKNFLDASKDKIFKGEGLDYFKQIIKSTIAEELAADKDFVEKIYAKITDKLINNDSTNISNLFSKIKSRLTDSISSATLSRSDDLLIMPSSDTIQKTPVPKHILGVPSNFAYGRTRSTTLYPSDYENNAISINMEYNDDVTLIFSKSYDNSPVYLDIEIQVKINDNRMQKKSLKLQYSDETTYNRVYEIAGPRGLFTRIPIYKGWYVQKRVSLYGDPFPDLLKL	DUF685 domain-containing protein _x000D_ BB_RS06590 BB_M22 p = 8.64e-06	-0.262233460	-0.416425734	0.835039472	0.221820045
2	6	WP_012663368.1	BB_RS06160	14,324	15,136	+	813	270	DUF685 domain-containing protein		MADDQEKLLIDEEETVQIKDLNKVTTVNDTDLLLLDDGAASSNAITFKNFLDASKDKIFKGEGLDYFKQIIKSTIAEELAADKDFVEKIYAKITDKLINNDSTNISNLFSKIKSRLTDSISSATLSRSDDLLIMPSSDTIQKTPVPKHILGVPSNFAYGRTRSTTLYPSDYENNAISINMEYNDDVTLIFSKSYDNSPVYLDIEIQVKINDNRMQKKSLKLQYSDETTYNRVYEIAGPRGLFTRIPIYKGWYVQKRASLYGDPFPDLLKL	DUF685 domain-containing protein _x000D_ BB_RS06160 BB_S22 p = 1.11e-06	-0.445496374	-0.517670028	0.339899452	0.347106102
3	6	WP_010883727.1	BB_RS07005	14,324	15,139	+	816	271	DUF685 domain-containing protein		MADDQEKLLIDEEETVQIKDLNKVTTVNDTDLLLLDDGAASSNAITFKNFLDASKDKIFKGEGLDYFKQIIKSTIAEELAADKDFVEKIYAKITDKLINNDSTNISNLFSKIKSRLTDSISSATLSRSDHLLIMPSSDTIQKTPVPKHILGVPSNLAYGSITRSTTLYPSDYENNAIFINMEDNDDVTLIFSKSYDNSPVYLDIEIQVKINDNRMQKKSLKLQYSDETTYNRVYEIAGPRGLFTRIPIYKGWYVQKRASLYGDPVPDLLKL	DUF685 domain-containing protein _x000D_ BB_RS07005 BB_L22 p = 8.22e-01	-0.001447609	-5.844685973	-5.844685973	0.001446158
4	6	WP_010883727.1	BB_RS05950	14,324	15,139	+	816	271	DUF685 domain-containing protein		MADDQEKLLIDEEETVQIKDLNKVTTVNDTDLLLLDDGAASSNAITFKNFLDASKDKIFKGEGLDYFKQIIKSTIAEELAADKDFVEKIYAKITDKLINNDSTNISNLFSKIKSRLTDSISSATLSRSDHLLIMPSSDTIQKTPVPKHILGVPSNLAYGSITRSTTLYPSDYENNAIFINMEDNDDVTLIFSKSYDNSPVYLDIEIQVKINDNRMQKKSLKLQYSDETTYNRVYEIAGPRGLFTRIPIYKGWYVQKRASLYGDPVPDLLKL	DUF685 domain-containing protein _x000D_ BB_RS05950 BB_P22 p = 4.01e-04	-0.350684190	-0.326227115	0.306722768	0.265893319
5	6	WP_010883727.1	BB_RS06795	14,331	15,146	+	816	271	DUF685 domain-containing protein		MADDQEKLLIDEEETVQIKDLNKVTTVNDTDLLLLDDGAASSNAITFKNFLDASKDKIFKGEGLDYFKQIIKSTIAEELAADKDFVEKIYAKITDKLINNDSTNISNLFSKIKSRLTDSISSATLSRSDHLLIMPSSDTIQKTPVPKHILGVPSNLAYGSITRSTTLYPSDYENNAIFINMEDNDDVTLIFSKSYDNSPVYLDIEIQVKINDNRMQKKSLKLQYSDETTYNRVYEIAGPRGLFTRIPIYKGWYVQKRASLYGDPVPDLLKL	DUF685 domain-containing protein _x000D_ BB_RS06795 BB_O22 p = 9.63e-01	-0.163961619	-0.406435758	0.147214576	0.684968725
6	6	WP_010883915.1	BB_RS07545	17,823	18,638	+	816	271	DUF685 domain-containing protein		MADDQEKLLIDEEETVQIKDLNKVTTVNDTDLLLLDNGAASSNAITFKNFLDASKDKIFKGEGLDYFKQIIKSTIAEELAADKDFVEKIYAKITDKLINNDSTNISNLFSKIKSRLTDSISSATLSKSDDLLIMPSSDTIQKTPVPKHILGVPSNFTYGSITRSTTLYPSDYENKAISINMEDNDDVTLIFYKNYDNDPIYLDIEIQVKINDNRMQKKSLKLMYSDEITYNWVYEITGPRGLFTRTPIYNGWYIQKRAYMYGDSVPDLLKL	DUF685 domain-containing protein _x000D_ BB_RS07545 BB_Q29 p = 1.96e-53	-1.083631934	-0.982809142	1.403554589	0.579186391
7	6	WP_010883778.1	BB_RS06375	14,277	15,092	+	816	271	DUF685 domain-containing protein		MADDQEKLLIDEEETVQIKDLNKVTTVNNTDLLLLDDGAASSNAITFKNFLKTVNHQTFKGEELGYFKEIIKSTIATELAADKDFIKSIYDLIVDKLIENESSKLSNLFSKIKSRLTDSISSATLSRSDDLLIMPSSDTIQKTPVPKHILGVPSNFTYGSITRSTTLYPSDYENKAISINMEDNDDVTLIFYKNYDNDPIYLDIEIQVKINDNRMQKKSLKLMYSDEITYNWVYEITGPRGLFTRTPIYNGWYIQKRASLYGDSVPDLLKL	DUF685 domain-containing protein _x000D_ BB_RS06375 BB_R22 p = 1.08e-03	-0.271810973	-0.333038720	0.520915999	0.228628869
8	6	WP_010890293.1	BB_RS04580	14,376	14,885	-	510	169	hypothetical protein		MADFDFTKLCKNFVLGVEHKACVHQTETAIVDVESPIIKPGDPVYSSGSSEMGEVLVKAATATAGVGPIRGFALKKADIALLESENYSPGELIPIRRAGEITVMLDNTFATPKIGDFVFLKGGKLVKDGKGGVQVGRIKDVSLDANSKVVLLDVNIGPEFESNGNRKFA	hypothetical protein _x000D_ BB_RS04580 BB_G18 p = 3.60e-07	-0.113436738	0.105163922	0.768531825	-0.981553544
9	1	WP_002657080.1	BB_RS00560	111,889	112,338	-	450	149	single-stranded DNA-binding protein		MADINSLVLSGRLTRDSELSYTESGMAVLRFSIANNRRMKKNDEWIDYPQYFDCVIFSKRAESLNDYLKKGKQVVVSGSLKYESWQDRNTGDKRSKVNIFVDNLQMFSSGSNTIQMQDSDVNSLTNHKKEDVVKDIDIVDDKFSEDIPF	single-stranded DNA-binding protein _x000D_ BB_RS00560 BB_0114 p = 2.63e-06	-0.327717440	-0.197778337	0.173904947	0.185789341
10	2	WP_002657824.1	BB_RS01805	375,661	375,939	+	279	92	DNA mismatch repair protein MutT		MADLEKINKIKVAEHIVECFGGIKNIKNIDKDLTRIKILVDSNSLVKRDDLTKNDNIIGTIKSNELTEVVINFEIIEDVYNKILYMMNEQKQ	DNA mismatch repair protein MutT _x000D_ BB_RS01805 BB_0367 p = 4.24e-30	0.387327574	0.266486606	-0.595556162	-0.327121933

Contact

Domazet-Lošo Research Group

Macroevolution Research. Our lab focuses on macro-evolutionary patterns across the tree of life.

Ruđer Bošković Institute

Division of Molecular Biology
Laboratory of Evolutionary Genetics
wing 5 / rooms 109-111

Biljenička cesta 54
HR-10000 Zagreb
Croatia

+385 (1) 4561 111 info@phylostrat.eu

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